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  1. Rosenblum LL, Supriatna J, Melnick DJ
    Am J Phys Anthropol, 1997 Sep;104(1):35-45.
    PMID: 9331452
    Mitochondrial DNA variation was surveyed in nine populations of the pigtail macaque (Macaca nemestrina), covering all three recognized subspecies in Southeast Asia. To do this, a 2,300 base pair fragment spanning the mitochondrial NAD 3 and NAD 4 genes and flanking tRNA subunits leucine and glycine was targeted for amplification and digested with a battery of 16 restriction endonucleases. Out of a total of 107 individuals, 32 unique haplotypes could be distinguished. Parsimony and neighbor-joining analyses grouped the haplotypes into five strongly supported assemblages representing China/Thailand, Malaysia, Sumatra, Borneo, and Siberut. These results indicate that the mainland and island mtDNA haplotypes are strictly and uniquely limited to the geographic ranges of the recognized morphological subspecies. Cladistic and neighbor-joining analyses indicate that inferred phylogenies of mtDNA haplotypes are congruent with subspecies designations. Furthermore, in support of morphological studies, results indicate that the Mentawai macaque is most likely not a distinct species but a subspecies of M. nemestrina.
  2. Supriatna J, Setiawati MR, Sudirja R, Suherman C, Bonneau X
    ScientificWorldJournal, 2022;2022:5073059.
    PMID: 36408196 DOI: 10.1155/2022/5073059
    Palm oil production has increased significantly, specifically in Indonesia and Malaysia. However, this growth has raised environmental concerns due to the high discharge of empty fruit bunches, palm oil mill effluents, and other solid wastes. Therefore, this study aims to examine the treatment of palm oil waste by composting and systematically review insights into its application through a systematic literature review approach. Among the 1155 articles, a total of 135 were selected for a systematic review of palm oil waste management developments and their applications, while 14 were used for determining compost quality according to the criteria and requirements established in the systematic literature review. Moreover, using Egger's test, JAMOVI 1.6.23 software was used to analyze random effects models with 95% confidence intervals and publication bias. The results showed that palm oil waste was optimally treated by composting, which is considered as a sustainable technology for protecting the environment, human safety, and economic value. The in-vessel method with a controlled composting chamber is the best system with a minimum time of 14 days. However, it requires tight control and provides a final product with a high microbial colony form outdoors and indoors compared to the windrow system. This study is useful to see the bias of research results and helps to find new studies that need to be developed, especially in this case related to the management of palm oil waste into organic compost fertilizer and its application methods in the field. It is suggested that applying palm oil waste or compost is mainly performed by mulching. In contrast, new challenges for better processing to produce organic fertilizers and applicable technologies for sustainable waste management are recommended. The method must be affordable, efficient, and practical, combining compost quality with maximum nutrient recovery.
  3. Amarasinghe AAT, Poyarkov NA, Campbell PD, Leo S, Supriatna J, Hallermann J
    Zootaxa, 2017 05 26;4272(1):103-118.
    PMID: 28610304 DOI: 10.11646/zootaxa.4272.1.5
    Eutropis rugifera has long been identified as a widespread species complex distributed in Nicobar, Peninsular Malaysia, Greater Sundaic Islands, Bali, Sulawesi and the Philippines. This skink was described by Stoliczka in 1870 from Nicobar Island based on a single specimen (holotype by monotypy). Later, Peters (1871), Bartlett (1895) and Werner (1896) described three more species which were morphologically similar to Euprepes percarinatus (from Java), Mabuia rubricollis (Borneo) and M. quinquecarinata (Sumatra) respectively, which are currently considered junior objective synonyms of Eutropis rugifera. We examined all the available synonym types and voucher specimens of Eutropis rugifera deposited at several museums. A morphological examination of the types of this species and mtDNA analysis (584 bp of 16S rRNA) of the samples from different biogeographic regions revealed that Eutropis rugifera from Nicobar Island, Bali Island, and Bawean Island are composed of a monophyletic species. However, the taxonomic status of the above population requires further clarification, and the population in Bawean Island may represent a cryptic species. Finally, we provide a complete redescription of E. rugifera based on its holotype.
  4. Amarasinghe AAT, Campbell PD, Riyanto A, Hallermann J, Hamidy A, Andayani N, et al.
    Zootaxa, 2024 Mar 13;5424(2):189-202.
    PMID: 38480290 DOI: 10.11646/zootaxa.5424.2.3
    Bronchocela celebensis Gray, 1845 is one of the rarest species of the genus, known only from less than 20 museum specimens collected from northern Sulawesi. It is often confused with its similar congener, B. cristatella, which occurs widely throughout the Indonesian Archipelago and Peninsular Malaysia, except on the Sulawesi mainland. Here, we examine the morphology of B. celebensis based on 46 museum specimens including freshly collected individuals, and redescribe the species based on the holotype (by monotypy). We studied the characters of B. celebensis with morphometric comparison to its allopatric congener B. cristatella from the adjacent islands of southern Sulawesi in Indonesia. Based on the current distribution pattern and the apparent threats, we update the conservation status of B. celebensis using the IUCN Red List Criteria and propose that it be considered as a Vulnerable (VU) species endemic to Sulawesi.
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