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  1. Othman, A.R., Shukor, M.Y., Johari, W.L.W., Dahalan, F.A.
    MyJurnal
    The pollution of heavy metals and toxic xenobiotics has become a central issue worldwide.
    Bioremediation of these toxicants are being constantly carried out using novel microbes.
    Molybdenum reduction to molybdenum blue is a detoxification process and mathematical
    modelling of the reduction process can reveal important parameters such as specific reduction
    rate, theoretical maximum reduction and whether reduction at high molybdenum concentration
    affected the lag period of reduction. The used of linearization method through the use of natural
    logarithm transformation, although popular, is inaccurate and can only give an approximate
    value for the sole parameter measured; the specific growth rate. In this work, a variety of
    models for such as logistic, Gompertz, Richards, Schnute, Baranyi-Roberts, Von Bertalanffy,
    Buchanan three-phase and more recently Huang were utilized for the first time to obtain values
    for the above parameters or constants. The modified Gompertz model was the best model in
    modelling the Mo-blue production curve from Serratia marcescens strain DR.Y10 based on
    statistical tests such as root-mean-square error (RMSE), adjusted coefficient of determination
    (R2), bias factor (BF), accuracy factor (AF) and corrected AICc (Akaike Information Criterion).
    Parameters obtained from the fitting exercise were maximum Mo-blue production rate (μm), lag
    time (l) and maximal Mo-blue production (Ymax) of X (h-1), Y (h) and Z (nmole Mo-blue),
    respectively. The application of primary population growth models in modelling the Moblue
    production rate from this bacterium has become a successful undertaking. The model
    may also be used in other heavy metals detoxification processes. The parameters
    constants extracted from this work will be a substantial help for the future development
    of further secondary models.
  2. Halmi, M.I.E., Baskaran Gunasekaran, Othman, A.R., Shukor, M.Y., Kamaruddin, K., Dahalan, F.A., et al.
    MyJurnal
    The volume of contaminated rivers in Malaysia continues to keep rising through the years. The
    cost of instrumental monitoring is uneconomical and prohibits schedule monitoring of
    contaminants particularly heavy metals. In this work, a rapid enzyme assay utilizing the
    molybdenum-reducing enzyme as an inhibitive assay, prepared in crude form from the
    molybdenum-reducing bacterium Serratia sp. strain DRY5 has been developed for monitoring
    the heavy metals mercury, silver, copper and chromium in contaminated waters in the Juru
    Industrial Estate. The crude enzyme extract transformed soluble molybdenum
    (phosphomolybdate) into a deep blue solution, which is inhibited by heavy metals such as
    mercury, silver, copper and chromium. The IC50 and Limits of Detection (LOD) values for
    mercury, copper, silver and cadmium were 0.245, 0.298, 0.367, 0.326, and 0.124, 0.086, 0.088
    and 0.094 mg L-1, respectively. The assay is rapid, and can be carried out in less than 10 minutes.
    In addition, the assay can be carried out at ambient temperature. The IC50 values for these heavy
    metals are more sensitive than several established assays. Water samples from various locations
    in the month of November from the Juru Industrial Estate (Penang) were tested for the presence
    of heavy metals using the developed assay. Enzyme activity was nearly inhibited for water
    samples from several locations. The presence of heavy metals was confirmed instrumentally
    using Atomic Emission Spectrometry and a Flow Injection Mercury System. The assay is rapid
    and simple and can be used as a first screening method for large scale monitoring of heavy
    metals.
  3. Othman, A.R., Rahman, M.F., Shukor, M.Y., Abu Zeid, I.M., Ariffin, F.
    MyJurnal
    Chemical toxins and organic contaminants such as hydrocarbons and dyes are major global
    contaminants with countless tones of those chemicals are created yearly with a significant
    amount release to the environment. In this work we screen the ability of a molybdenum-reducing
    bacterium isolated from contaminated soil to decolorize various azo and triphenyl methane dyes
    independent of molybdenum reduction. Biochemical analysis resulted in a tentative identification
    of the bacterium as Enterobacter sp. strain Zeid-6. The bacterium was able to decolorize the azo
    dye Orange G. The bacterium reduces molybdate to Mo-blue optimally at pH between 5.5 and
    8.0 and temperatures of between 30 and 37 oC. Other requirements include a phosphate
    concentration of 5 mM and a molybdate concentration of 20 mM. The absorption spectrum of the
    Mo-blue produced was similar to previous Mo-reducing bacterium, and closely resembles a
    reduced phosphomolybdate. Molybdenum reduction was inhibited by copper, lead, mercury and
    silver which showed 36.8, 16.9, 64.9 and 67.6% inhibition to Mo-reducing activity of
    Enterobacter sp. strain Zeid-6, respectively. The resultant molybdenum blue spectrum closely
    resembles the spectrum of molybdenum blue from the phosphate determination method. The
    ability of this bacterium to detoxify molybdenum and decolorize azo dye makes this bacterium
    an important tool for bioremediation.
  4. Abo-Shakeer, L.K.A., Yakasai, M.H., Rahman, M.F., Syed, M.A., Bakar, N.A., Othman, A.R.
    MyJurnal
    Molybdenum is an emerging pollutant. Bioremediation of this heavy metal is possible by the
    mediation of Mo-reducing bacteria. These bacteria contain the Mo-reducing enzymes that can
    conver toxic soluble molybdenum into molybdenum blue; a less soluble and less toxic form of the
    metal. To date only the enzyme has been purified from only one bacterium. The aim of this study is
    to purify the Mo-reducing enzyme from a previously isolated Mo-reducing bacterium Bacillus
    pumilus strain Lbna using ammonium sulphate fractionation followed by ion exchange and then
    gel filtration. Two clear bands were obtained after the gel filtration step with molecular weights
    of 70 and 100 kDa. This indicates that further additional purification methods need to be used
    to get a purified fraction. Hence, additional steps of chromatography such as hydroxyapatite or
    chromatofocusing techniques can be applied in the future.
  5. Abo-Shakeer, L.K.A., Rahman, M.F.A., Yakasai, H., Syed, M.A., Shukor M.Y., Bakar, N.A., et al.
    MyJurnal
    Bacterial based remediation of environmental toxicants is a promising innovative technology
    for molybdenum pollution. To date, the enzyme responsible for molybdate reduction to Moblue
    from bacteria show that the Michaelis-Menten constants varies by one order of magnitude.
    It is important that the constants from newer enzyme sources be characterized so that a
    comparison can be made. The aim of this study is to characterize kinetically the enzyme from a
    previously isolated Mo-reducing bacterium; Bacillus pumilus strain Lbna. The maximum
    activity of this enzyme occurred at pH 5.5 and in between 25 and 35 oC. The Km and Vmax of
    NADH were 6.646 mM and 0.057 unit/mg enzyme, while the Km and Vmax of LPPM were 3.399
    mM and 0.106 unit/mg enzyme. The results showed that the enzyme activity for Bacillus
    pumilus strain Lbna were inhibited by all heavy metals used. Zinc, copper, silver, chromium,
    cadmium and mercury all caused more than 50% inhibition to the Mo-reducing enzyme activity
    with copper being the most potent with an almost complete inhibition of enzyme activity
    observed.
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