Clinacanthus nutans, known to the locals as Belalai Gajah, is a medicinal plant widely used by Malaysians in the belief to cure various diseases including cancer. However, the production of Belalai Gajah hardly fulfils the market demand since the growing techniques of stem cutting and tissue culture are inefficient and expensive. Therefore, improvements in tissue culture techniques and materials application are required. Hence, this study tested Carica papaya (locally know as papaya) stem, an agricultural waste, to enhance the tissue culture of C. nutans. The effects of C. papaya stem powder and extract on the shoot proliferation of C. nutans parameters were investigated. The average number of shoot, leaves and length of leaves were observed. Phytochemicals screening was also conducted. Overall, C. papaya stem extract showed positive performance and 1% extract was found to be the optimum concentration to enhance the shoot proliferation. Meanwhile, C. papaya stem powder inhibited the shoot proliferation. It was also found that flavonoids, glycosides, steroid and terpenoid contributed in the shoot proliferation. In conclusion, the papaya stem extract is a potential in-vitro supplement for tissue culture studies. This study gained insights in sustainable green economy and showed that zero waste can be attained by converting local papaya stem waste to valuable product. In addition, sustainable technology in pharmaceutical approach could be addressed through in-vitro low cost large-scale production of Belalai Gajah medicinal plant.