Tapioca and sweet potato are the fourth and fifth most consumed crops in Malaysia. The activity concentrations of natural radionuclides in these vegetables were assessed from two regions in Malaysia (Kedah and Penang) along with soil samples using gamma ray spectroscopy. The transfer factors of 226Ra, 232Th and 40K from soil to vegetables were calculated, and a dose assessment was performed. The activity concentrations of 226Ra, 232Th and 40K in soil samples did not show a significant variation with the regions investigated, and the average values obtained, in Bq/kg, (±SD) were as follows: 80 ± 41, 56 ± 12, 516 ± 119, respectively. The respective average activity concentrations in vegetables were as follows, in Bq/kg: (±SD) 2.0 ± 0.5, 6 ± 2, 153 ± 49. The corresponding transfer factors were calculated to be 0.03, 0.11 and 0.31 for 226Ra, 232Th and 40K, respectively. The average annual effective doses due to the exposure from soil and ingestion of vegetables were found to lie within the worldwide ranges.