Displaying publications 21 - 40 of 66 in total

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  1. Mahadi Mohammad, Zaharatul Naa'imah Apandi, Hana Abdul Wahab Marican, Kamphol, Nadthikphorn, Nur Ain Amani Abdul Mubin, Sazlina Salleh, et al.
    Trop Life Sci Res, 2016;27(11):87-93.
    MyJurnal
    Coral reefs in the northern region of the Straits of Malacca have a diverse group
    of octocorals growing on its bed. The octocorals identified in this study are from islands
    along the Straits. In this study, 23 specimens were identified, belonging to 4 sub-orders,
    which have been subdivided into 8 families. From these 8 families, 15 different genera
    have been identified. The identification process for this research was conducted based on
    five important keys; the external form and colouration, polyps or colonial and fundamental
    structure of colonies, monomorphic or dimorphic, the arrangement of polyps, and the
    arrangement of sclerites.
    Matched MeSH terms: Coral Reefs
  2. Ohara T, Hoeksema BW, Wee HB, Reimer JD
    Mar Environ Res, 2021 Aug;170:105445.
    PMID: 34392055 DOI: 10.1016/j.marenvres.2021.105445
    Offshore Onna Village, Okinawa Island, Japan, there is a large and densely covered coral assemblage of free-living mushroom corals (Scleractinia: Fungiidae) on a reef slope at depths from 20 m to 32 m, covering an area of approximately 350 × 40 m2. From previous research, it is known that migration distances of mushroom corals may depend on coral shapes, coral sizes, substrate, and bottom inclination. However, until now there have been no published examples of regular Fungiidae movement and behavior from typhoon-exposed coastlines, such as those in the western Pacific Ocean. Our surveys across three years offshore Onna Village show that mushroom corals always move in down-slope direction from shallow to deeper reef zones. The results indicated that mushroom corals migrated faster in autumn than in other seasons, and that oval-elongate fungiids, and particularly those with a smooth underside, migrated more quickly than species with other shapes. Surprisingly, we observed a negative relationship between the presence of typhoons and migration rates. We also observed active migration by fungiid individuals to escape situations in which they were threatened to become overgrown by Acropora corals, or when they needed to escape from burial underneath coral debris.
    Matched MeSH terms: Coral Reefs
  3. Lee JN, Che Abd Rahim Mohamed
    Sains Malaysiana, 2011;40:1179-1186.
    The aim of this study was to determine the accumulation of settling particles in coral reefs of Peninsular Malaysia. Settling particles were collected from the coral reefs of Port Dickson, Pulau Langkawi, Pulau Tioman, Pulau Redang and Pulau Tinggi from 2005 to 2008. The average total settling particles in Pulau Langkawi and Port Dickson was 49.8 mg/cm2/day, while for Pulau Tioman, Pulau Redang, and Pulau Tinggi was 3.5 mg/cm2/day. The results showed that accumulations rate in west coast were higher than east coast of Peninsular Malaysia. However, Pulau Tioman in the east coast received high accumulations rate of settling particles in certain times of the year due to sediment resuspension at shallow reefs caused by high energy seasonal yearly wave and monsoon.
    Matched MeSH terms: Coral Reefs
  4. Robert R, Lee DJ, Rodrigues KF, Hussein MA, Waheed Z, Kumar SV
    Zootaxa, 2016 Nov 29;4200(2):zootaxa.4200.2.2.
    PMID: 27988618 DOI: 10.11646/zootaxa.4200.2.2
    Acropora is the most biologically diverse group of reef-building coral, and its richness peaks at the Indo-Malay-Philippine Archipelago, the centre of global coral reef biodiversity. In this paper, we describe the species richness of Acropora fauna of North Borneo, East Malaysia, based on review of literature and as corroborated by voucher specimens. Eighty-three species of Acropora are reported here; four species are literature based and 79 are supported by voucher specimens that were subsequently photographed. New records for North Borneo were recorded for 12 species, including Acropora suharsonoi Wallace 1994 that was previously thought to be confined to a few islands along Lombok Strait, Indonesia. The diversity of Acropora in North Borneo is comparable to that of Indonesia and the Philippines, despite the area's smaller reef areas. This further reinforces its inclusion as part the global hotspot of coral biodiversity.
    Matched MeSH terms: Coral Reefs
  5. Miller J, Sweet MJ, Wood E, Bythell J
    PeerJ, 2015;3:e1391.
    PMID: 26732905 DOI: 10.7717/peerj.1391
    Two of the most significant threats to coral reefs worldwide are bleaching and disease. However, there has been a scarcity of research on coral disease in South-East Asia, despite the high biodiversity and the strong dependence of local communities on the reefs in the region. This study provides baseline data on coral disease frequencies within three national parks in Sabah, Borneo, which exhibit different levels of human impacts and management histories. High mean coral cover (55%) and variable disease frequency (mean 0.25 diseased colonies m(-2)) were found across the three sites. Highest disease frequency (0.44 diseased colonies per m(2)) was seen at the site closest to coastal population centres. Bleaching and pigmentation responses were actually higher at Sipadan, the more remote, offshore site, whereas none of the other coral diseases detected in the other two parks were detected in Sipadan. Results of this study offer a baseline dataset of disease in these parks and indicate the need for continued monitoring, and suggest that coral colonies in parks under higher anthropogenic stressors and with lower coral cover may be more susceptible to contracting disease.
    Matched MeSH terms: Coral Reefs
  6. Waheed Z, van Mil HG, Syed Hussein MA, Jumin R, Golam Ahad B, Hoeksema BW
    PLoS One, 2015;10(12):e0146006.
    PMID: 26719987 DOI: 10.1371/journal.pone.0146006
    The coral reefs at the northernmost tip of Sabah, Borneo will be established under a marine protected area: the Tun Mustapha Park (TMP) by the end of 2015. This area is a passage where the Sulu Sea meets the South China Sea and it is situated at the border of the area of maximum marine biodiversity, the Coral Triangle. The TMP includes fringing and patch reefs established on a relatively shallow sea floor. Surveys were carried out to examine features of the coral reefs in terms of scleractinian species richness, and benthic reef assemblages following the Reef Check substrate categories, with emphasis on hard coral cover. Variation in scleractinian diversity was based on the species composition of coral families Fungiidae (n = 39), Agariciidae (n = 30) and Euphylliidae (n = 15). The number of coral species was highest at reefs with a larger depth gradient i.e. at the periphery of the study area and in the deep South Banggi Channel. Average live hard coral cover across the sites was 49%. Only 7% of the examined reefs had > 75% hard coral cover, while the majority of the reef sites were rated fair (51%) and good (38%). Sites with low coral cover and high rubble fragments are evidence of blast fishing, although the observed damage appeared old. Depth was a dominant factor in influencing the coral species composition and benthic reef communities in the TMP. Besides filling in the information gaps regarding species richness and benthic cover for reef areas that were previously without any data, the results of this study together with information that is already available on the coral reefs of TMP will be used to make informed decisions on zoning plans for conservation priorities in the proposed park.
    Matched MeSH terms: Coral Reefs
  7. Chelliah A, Amar HB, Hyde J, Yewdall K, Steinberg PD, Guest JR
    PeerJ, 2015;3:e777.
    PMID: 25737817 DOI: 10.7717/peerj.777
    Knowledge about the timing and synchrony of coral spawning has important implications for both the ecology and management of coral reef ecosystems. Data on the timing of spawning and extent of synchrony, however, are still lacking for many coral reefs, particularly from equatorial regions and from locations within the coral triangle. Here we present the first documentation of a multi-species coral spawning event from reefs around Pulau Tioman, Peninsular Malaysia, a popular diving and tourist destination located on the edge of the coral triangle. At least 8 coral species from 3 genera (Acropora, Montipora and Porites) participated in multi-species spawning over five nights in April 2014, between two nights before and two nights after the full moon. In addition, two Acropora species were witnessed spawning one night prior to the full moon in October 2014. While two of the Acropora species that reproduced in April (A. millepora and A. nasuta) exhibited highly synchronous spawning (100% of sampled colonies), two other common species (A. hyacinthus and A. digitifera) did not contain visible eggs in the majority of colonies sampled (i.e., <15% of colonies) in either April or October, suggesting that these species spawn at other times of the year. To the best of our knowledge, this is the first detailed documented observation of multi-species coral spawning from reefs in Malaysia. These data provide further support for the contention that this phenomenon is a feature of all speciose coral assemblages, including equatorial reefs. More research is needed, however, to determine the seasonal cycles and extent of spawning synchrony on these reefs and elsewhere in Malaysia.
    Matched MeSH terms: Coral Reefs
  8. Waheed Z, Benzoni F, van der Meij SE, Terraneo TI, Hoeksema BW
    Zookeys, 2015.
    PMID: 26312025 DOI: 10.3897/zookeys.517.9308
    Layang-Layang is a small island part of an oceanic atoll in the Spratly Islands off Sabah, Malaysia. As the reef coral fauna in this part of the South China Sea is poorly known, a survey was carried out in 2013 to study the species composition of the scleractinian coral families Fungiidae, Agariciidae and Euphylliidae. A total of 56 species was recorded. The addition of three previously reported coral species brings the total to 59, consisting of 32 Fungiidae, 22 Agariciidae, and five Euphylliidae. Of these, 32 species are new records for Layang-Layang, which include five rarely reported species, i.e., the fungiids Lithophyllonranjithi, Podabaciasinai, Sandalolithaboucheti, and the agariciids Leptoseriskalayaanensis and Leptoseristroglodyta. The coral fauna of Layang-Layang is poor compared to other areas in Sabah, which may be related to its recovery from a crown-of-thorns seastar outbreak in 2010, and its low habitat diversity, which is dominated by reef slopes consisting of steep outer walls. Based on integrative molecular and morphological analyses, a Pavona variety with small and extremely thin coralla was revealed as Pavonamaldivensis. Since specimens from Sabah previously identified as Pavonamaldivensis were found to belong to Pavonaexplanulata, the affinities and distinctions of Pavonamaldivensis and Pavonaexplanulata are discussed.
    Matched MeSH terms: Coral Reefs
  9. Guest JR, Low J, Tun K, Wilson B, Ng C, Raingeard D, et al.
    Sci Rep, 2016 Feb 15;6:20717.
    PMID: 26876092 DOI: 10.1038/srep20717
    While many studies of coral bleaching report on broad, regional scale responses, fewer examine variation in susceptibility among coral taxa and changes in community structure, before, during and after bleaching on individual reefs. Here we report in detail on the response to bleaching by a coral community on a highly disturbed reef site south of mainland Singapore before, during and after a major thermal anomaly in 2010. To estimate the capacity for resistance to thermal stress, we report on: a) overall bleaching severity during and after the event, b) differences in bleaching susceptibility among taxa during the event, and c) changes in coral community structure one year before and after bleaching. Approximately two thirds of colonies bleached, however, post-bleaching recovery was quite rapid and, importantly, coral taxa that are usually highly susceptible were relatively unaffected. Although total coral cover declined, there was no significant change in coral taxonomic community structure before and after bleaching. Several factors may have contributed to the overall high resistance of corals at this site including Symbiodinium affiliation, turbidity and heterotrophy. Our results suggest that, despite experiencing chronic anthropogenic disturbances, turbid shallow reef communities may be remarkably resilient to acute thermal stress.
    Matched MeSH terms: Coral Reefs
  10. Bachok Z, Safuan CDM, Roseli NH, Akhir MF
    Data Brief, 2020 Oct;32:106182.
    PMID: 32923531 DOI: 10.1016/j.dib.2020.106182
    This article provides raw datasets of the coral reefs status in Pulau Bidong, southern of South China Sea before and after being strike by the tropical storm Pabuk on January 2019. Data were collected using a rapid coral survey method called Coral Video Transect (CVT) technique. The data were collected along a 100 m transect line set up parallel to the shoreline and at a constant depth. In total, eight transects were surveyed during both periods (pre - August 2016, post - March 2019). Back in laboratory, the footage was then extracted into non-overlapping frames or still images prior to image analysis using Coral Point Count with Excel Extension (CPCe) software. The benthic coral reefs relative percentage cover was automatically generated after the image analysis and represented by five major categories; live coral (C), algae (ALG), other invertebrates (OT), dead coral (DC), and sand silt and rock (SR). Live coral cover was identified up to the genus level. This raw dataset was used in this article. The data provided in this article could be of significant use for future studies especially on coral recovery after the natural disturbances. It can provide a baseline assessment especially for coral reefs management as well as to comprehend changes in coral health status in the face of natural and anthropogenic disturbances. The data presented here support the information in the article Safuan et al. (2020).
    Matched MeSH terms: Coral Reefs
  11. B. Mabel Manjaji Matsumoto, Muhammad Ali Syed Hussein, Yee, Jean-Chai
    MyJurnal
    The central and north west coast of Sabah lies along the western extremity of the Coral Triangle, within which are situated several marine protected areas (MPAs). In the present study we determined in situ coral reef fish populations in several localities along the west coast of Sabah, by exploring species abundance, richness and diversity of ten economically important fish species. The underwater surveys were conducted from May to December 2015. During this eight- month period, surveys at each site were undertaken once every two months. Dives were conducted during the daylight hours. A total of 171 individuals from the targeted fish species were enumerated from the 349 still images and 220 minutes of video footage. Abundance was observed mainly in the semi-protected MPA (n=110) with only one fish species recorded with more than 2 individuals at protected MPA and unprotected sites. We observed a correlation between fish species richness and coral topographic complexity, with study sites at the semi-protected MPA having the most complex topography landscape, and accordingly recording the highest Shannon-Wiener index (H= 2.85). Higher abundance recorded at study sites in the unprotected sites and semi-protected MPA indicate that such areas could potentially become de facto MPAs. A long-term monitoring, assessment and evaluation of the multiple degrees of variables involved such as length-weight relationship, type of habitat, variation in depth, and species behaviour are recommended in order to understand better the relationship and dynamics between these variables.
    Matched MeSH terms: Coral Reefs
  12. Darling ES, McClanahan TR, Maina J, Gurney GG, Graham NAJ, Januchowski-Hartley F, et al.
    Nat Ecol Evol, 2019 Sep;3(9):1341-1350.
    PMID: 31406279 DOI: 10.1038/s41559-019-0953-8
    Without drastic efforts to reduce carbon emissions and mitigate globalized stressors, tropical coral reefs are in jeopardy. Strategic conservation and management requires identification of the environmental and socioeconomic factors driving the persistence of scleractinian coral assemblages-the foundation species of coral reef ecosystems. Here, we compiled coral abundance data from 2,584 Indo-Pacific reefs to evaluate the influence of 21 climate, social and environmental drivers on the ecology of reef coral assemblages. Higher abundances of framework-building corals were typically associated with: weaker thermal disturbances and longer intervals for potential recovery; slower human population growth; reduced access by human settlements and markets; and less nearby agriculture. We therefore propose a framework of three management strategies (protect, recover or transform) by considering: (1) if reefs were above or below a proposed threshold of >10% cover of the coral taxa important for structural complexity and carbonate production; and (2) reef exposure to severe thermal stress during the 2014-2017 global coral bleaching event. Our findings can guide urgent management efforts for coral reefs, by identifying key threats across multiple scales and strategic policy priorities that might sustain a network of functioning reefs in the Indo-Pacific to avoid ecosystem collapse.
    Matched MeSH terms: Coral Reefs
  13. Qiu S, Chen B, Du J, Loh KH, Liao J, Liu X, et al.
    Biodivers Data J, 2021;9:e63945.
    PMID: 33732033 DOI: 10.3897/BDJ.9.e63945
    Background: The Xisha Islands are composed of the Yongle Islands and the Xuande Islands in Hainan Province, China. It has one of the highest species diversity in the world and is also a typical oceanic distribution area of coral reefs globally. The ichthyofauna of the Xisha Islands were recorded by underwater visual census in May 2019 and July 2020. The survey data were combined with previous records of species into the checklist of the Xisha Islands presented herein. A total of 691 species, belonging to 24 orders and 97 families, was recorded. The major families were Labridae, Pomacentridae, Serranidae, Chaetodontidae, Hexanchidae, Lutjanidae, Scaridae, Gobiidae, Scorpaenidae and Carangidae. In this study, the Coral Fish iversity Index (CFDI) of six families (Chaetodontidae, Pomacanthidae, Pomacentridae, Labridae, Scaridae and Acanthuridae) was 229, indicating 756 coral fishes. In terms of the IUCN Red List, one species is Critically Endangered (Glyphis gangeticus), six species are Endangered (Stegostoma fasciatum, Aetomylaeus maculatus, Aetomylaeus vespertilio, Epinephelus akaara, Cheilinusundulatus sp. and Xiphias gladius), 16 species are Vulnerable, and 13 species are Near Threatened in the Xisha Archipelago, so conservation should be strengthened in this area in the future.

    New information: One species is a new record for China (Dischistodus pseudochrysopoecilus) and 23 species are newly found in the Xisha Islands.

    Matched MeSH terms: Coral Reefs
  14. A'ziz ANA, Minhat FI, Pan HJ, Shaari H, Saelan WNW, Azmi N, et al.
    Sci Rep, 2021 Apr 26;11(1):8890.
    PMID: 33903697 DOI: 10.1038/s41598-021-88404-3
    Pulau Tioman is a famous tourist island off Peninsular Malaysia with beautiful coral reefs. This study aims to assess the health of the coral reefs surrounding Pulau Tioman based on the application of the Foraminifera in Reef Assessment and Monitoring Index (FI). Ten sampling sites around Pulau Tioman were studied with a total of 30 samples. Eight orders, 41 families, 80 genera, and 161 species of benthic foraminifera were identified. The agglutinated type of foraminifera constituted 2-8% of the total assemblages. Calcareous hyaline and porcelaneous groups represented 79% and 19% of the total assemblages, respectively. Symbiont-bearing taxa were the most common foraminifera. The results indicate that most of the sampling sites are conducive for coral reef growth with good recoverability from future stress to the ecosystem. However, several areas with higher coastal development and tourism have reduced water and sediment quality. Therefore, the limit on the number of visitors and tourists should be revised to enable coral growth and health. The FI values in this study showed a positive correlation with good water qualities and a negative correlation with organic matter enrichment. The FI is a good measure to assess the health of a coral reef and can be applied to other reef ecosystems around Malaysia.
    Matched MeSH terms: Coral Reefs
  15. MUHAMMAD SUZURI HITAM, NURSYAHIRAH HAFIZ, ZAINUDDIN BACHOK, ZAINUDDIN BACHOK, MOHD SAFUAN CHE DIN
    MyJurnal
    Reef rubble representsthe broken components of the coraland reefstructure which could be in the form of dead,broken or other fragmented coral.The process to estimate the distribution of reef rubble is currently done manually and thus takesa long timeto completeand is laborious. This paper presentsan image-processing-basedmethod to estimate the distribution of reef rubbles in a coral reef environmentfrom a still image. The method is basically a series of image processing steps includingimage complement, image binarization, edgedetection, smoothing by Weiner filter and followed by erosion and dilation process.The experimentalresults showedthat the system wasable to roughly estimate the distribution of reef rubble.
    Matched MeSH terms: Coral Reefs
  16. PAULEEN ONG, MUHAMMAD SUZURI HITAM, ZAINUDDIN BACHOK, ZAINUDDIN BACHOK, MOHD SAFUAN CHE DIN
    MyJurnal
    At present, marine scientists employ manual method to estimate the components in coral reef environment,where Coral Point Count with Excel extensions (CPCe) software is used to determine the coral reef components and substrate coverage. This manual processis laboriousand time consuming,and needsexpertsto conduct the survey. In this paper, a prototype for estimating the distribution of sand cover in coral reef environment from still images by using colourextraction methods was introduced. The coloursegmentation called delta E was used to calculate the colourdifference between two coloursamples. Another method used wascolourthresholdby setting the range of sand colourpixels. Thesystem was developed by using a MATLAB software withimage processing toolbox. The developed system was semi-automatic computer-based system that can be used by researcherseven with little knowledge and experience to estimatethepercentage of sand coveragein coral reef still images.
    Matched MeSH terms: Coral Reefs
  17. Louis YD, Bhagooli R, Seveso D, Maggioni D, Galli P, Vai M, et al.
    Mol Ecol, 2020 11;29(22):4382-4394.
    PMID: 32967057 DOI: 10.1111/mec.15642
    Corals show spatial acclimatisation to local environment conditions. However, the various cellular mechanisms involved in local acclimatisation and variable bleaching patterns in corals remain to be thoroughly understood. In this study, the modulation of a protein implicated in cellular heat stress tolerance, the heat shock protein 70, was compared at both gene (hsp70) and protein (Hsp70) expression level in bleaching tolerant near-coast Acropora muricata colonies and bleaching susceptible reef colonies, in the lagoon of Belle Mare (Mauritius). The relative Hsp70 levels varied significantly between colonies from the two different locations, colonies having different health conditions and the year of collection. Before the bleaching event of 2016, near-coast colonies had higher basal levels of both Hsp70 gene and protein compared to reef colonies. During the bleaching event, the near-coast colonies did not bleach and had significantly higher relative levels of both Hsp70 gene and protein compared to bleached reef colonies. No significant genetic differentiation between the two studied coral populations was observed and all the colonies analysed were associated with Symbiodiniaceae of the genus Symbiodinium (Clade A) irrespective of location and sampling period. These findings provide further evidence of the involvement of Hsp70 in conferring bleaching tolerance to corals. Moreover, the consistent expression differences of Hsp70 gene and protein between the near-coast and reef coral populations in a natural setting indicate that the modulation of this Hsp is involved in local acclimatisation of corals to their environments.
    Matched MeSH terms: Coral Reefs
  18. Othman BH, Toda T, Kikuchi T
    Zookeys, 2016.
    PMID: 27551211 DOI: 10.3897/zookeys.605.8562
    A new species of Leptostraca, Nebalia terazakii sp. n. is described and figured. The species was sampled from the coral reefs of Pulau Payar Marine Park, Langkawi, Malaysia. There are 32 existing species of Nebalia but Nebalia terazakii sp. n. can be distinguished from the other known species of Nebalia by the following combination of characters: the rostrum is 1.89 times as long as wide and the eyes have no dorsal papilla or lobes. Article 4 of the antennular peduncle has one short thick distal spine. The proximal article of the endopod of maxilla 2 is shorter than the distal, a feature peculiar to Nebalia terazakii sp. n., the exopod of maxilla 2 is longer than article 1 of the endopod, the posterior dorsal borders of the pleonites 6 to 7 are provided with distally sharp denticles, anal plate with prominent lateral shoulder and finally, the terminal seta of the caudal rami is 1.17 times the length of the entire rami.
    Matched MeSH terms: Coral Reefs
  19. Shahbudin Saad, Fikri Ahmad Khodzori
    MyJurnal
    The number of endangered coral species is increasing over the past decades due to multiple stresses and threats. Euphylliidae corals are among the species heavily targeted for the marine aquarium trade due to their colourful appearance and aesthetic importance. However, their distribution in Peninsular Malaysia has not been thoroughly investigated. Present study aims to investigate the diversity and abundance patterns of euphylliid species at 36 reef sites in Marine Protected Areas of Tioman, Redang and Payar Islands. Video transect surveyed a total of 671 euphylliids individuals belonging to six species from three genera. The diversity and evenness indices of euphylliids were significantly higher (P
    Matched MeSH terms: Coral Reefs
  20. Mustapha M, Lihan T, Khalid L
    Sains Malaysiana, 2014;43:1363-1371.
    Coral reefs are rich in biodiversity and ecosystem services. However increase in degradation are still occurring at an alarming rate. In management of this ecosystem, determination of its spatial distribution is of importance. Satellite imageries can be used to map distribution extent using spectral characteristics which is a fundamental parameter in mapping. The aims of this study were to determine the spectral characteristics of corals and associated habitats and to map its spatial distribution using 2009 ALOS advanced visible and near infrared radiometer type 2 (AVNIR-2) satellite imagery. Results indicated that coral and habitats surrounding the area display variation in the spectral characteristics magnitude but displays similar spectral curve. Spectral characteristics from the corals and surrounding habitats were determined by presence of benthic microalgae and calcium carbonate. Maximum likelihood classification on the image produced five main classes. Spatial distribution of coral and associated habitats indicated five main zones which are sandy shore zone, sandy intertidal zone, seagrass zone, coral/submerged sandy zone and rocky zone. Distribution of live corals indicated coverage of 0.54 km2, sea grass (0.94 km2), sandy bottom (1.31 km2) and rocky shores (0.19 km2). The results of this study indicated that ALOS satellite data was able to determine variation in spectral characteristics of coral reefs and other habitats thus is capable of mapping the ecosystems spatial distribution.
    Matched MeSH terms: Coral Reefs
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